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Services
Consulting
Training
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training

At Compendia our training services enable users to be productive and efficient with Oncomine. Courses range from basic concepts to advanced analysis workflows. Each module is designed to guide users through step-by-step scenarios. Content includes case studies focusing on specific targets and workflows.

All training courses are instructor led and can be scheduled either at your location or via a web seminar. Each course has been designed to first introduce a concept and then reinforce it with examples and workflows. The instructor’s toolbox is filled with demonstrations, training booklets, slide presentations, easy to follow exercises and quick start guides.

Custom instruction is available and can focus on your areas of interest such as workflows, targets, disease, tissue or pathways. Additionally, Compendia offers one-on-one instruction at your own desktop through a web seminar. This complete training curriculum enables you to master Oncomine. 

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overview
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MODULE 1: INTRO TO ONCOMINE

• Oncomine overview
• Content and analyses
• User interface and navigation
• Search by Gene
• Search by Profile
• Browse Profiles or Catalog
• Summary

MODULE 2: ADVANCED GENE SEARCH

• Gene Search and Summary View
• Differential Expression
• Co-expression
• Outlier Analysis
• Annotation
• Case Studies
   Biomarker Discovery & Validation: Prostate Specific Antigen
   Oncogene Discovery: ERBB Retrospective Study
• Summary

MODULE 3: ADVANCED PROFILE SEARCH

• Advanced Profile Search
• Search
• Meta-Analysis
• Filter
• Enrichment
• Interactome
• Pathway
• Outlier
• Case Studies
   Target Validation: AMACR Prostate Cancer Biomarker
   Target Discovery and Validation: Prostate Fusion Genes
• Summary

MODULE 4: ONCOMINE CASE STUDIES

• Biomarker Discovery & Validation
• Prostate Specific Antigen
• Oncogene Discovery
• ERBB Retrospective Study
• Target Validation
• AMACR Prostate Cancer Biomarker
• Target Discovery and Validation
• Prostate Fusion Genes

MODULE 5: INTRO TO ONCOMINE CONCEPTS MAP

• Oncomine Concepts Map Overview
• Content & Association Analysis
• Getting Started
• Search by Gene & Concept
• Search by Browse Concepts & • Concept Links
• Upload & Analyze a Concept
• Summary
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